AY695111 ---t---------------------------a-cgc-ccga--tctcgt-c-c-gatctcg-g-aagct--aagcagggt-cgggcc-tg-gttagta-- AB234037 ---atccac-ggccata--gga-ctctg-aaagcac-cgca--tcccgt-c-c-gatctgc-g-cagtt--aaccagagtgccg-cc-c-agttagtacc Eremothecium_gossypii ---ggttgc-ggccata--tct-accag-aaagcac-cgtt--tcccgt-c-c-gatcaactg-tagtt--aagctg-gtaagagcc-t--g--accgag Arabidopsis_thaliana ---ggatgc-gatcata--cca-gcact-aatgcac-cgga--tcccat-c-a-gaactcc-g-cagtt--aagcgtgcttgggcga-ga-g-tagta-- Arabidopsis_thaliana ---ggatgc-gatcata--cca-gcact-aatgcac-cgga--tcccat-c-a-gaactcc-g-cagtt--aagc-gtgcttggg-c-ga-g--agtagt Arabidopsis_thaliana ---ggatgc-gatcata--cca-gcact-aatgcac-cgga--tcccat-c-t-gaactcc-g-cagtt--aatc-gtgcttggg-c-ga-g--agtagt Triticum_turgidum_subsp._dicoccoides ---ggatgccgatcata--cca-gcact-aaagcac-cgga--tcccat-c-a-gaactcc-g-aagtt--aagc-gtgcttggg-c-ga-g--agtagt Secale_cereale_subsp._ancestrale ---ggatgc-gatcata--cca-gcaca-aaaacac-cgga--tcccat-c-a-gaactcc-g-aagtt--aagc-gtgcttgg--c-ga-g--agtagt Eleusine_coracana ---ggatgc-gatcata--cca-gcact-aaagcac-cgga--tcccat-c-a-gaactcc-g-aagtt--aagc-gtgcttggg-c-ga-g--agtagt Solanum_berthaultii ---ggatgc-gatcata--cca-gcact-aacgcac-cgga--tcccat-c-a-gaactcc-g-cagtt--aagc-gtgcttggg-c-ga-g--agtagt Pinus_densata ---gggtgc-gatcata--cca-gcgtt-aatgcac-cgga--tcccat-c-a-gaactcc-g-cagtt--aagc-gcgcttggg-c-ta-g--agtagt Abies_alba ---gggtgc-gatcata--cca-gcgtt-aatgcac-cgga--tcccat-c-a-gaactcc-g-cagtt--acgc-gcgcttggg-c-ta-g--agtagt Drosophila_melanogaster ---gccaac-gaccata--cca-cgctg-aatacat-cggt--tctcgt-c-c-gatcacc-g-aaatt--aagc-agcgtcggg-c-gc-g--gttagt Samia_cynthia_ricini_x_Bombyx_mori ---gccaac-gtccata--cca-tgttg-aatacac-cggt--tctcgt-c-c-gatcacc-g-aagtc--aagc-aacatcggg-cgta-g---tcagt Cerastoderma_glaucum ---gtctac-gaccata--tcacgttgt-gaac-ac-cggt--tctcgt-c-c-gatcacc-g-aagtt--aagc-aacgtcgagcc--c-g--gtaagt Lingula_anatina ---gtctac-ggccata--cca-ccggg-aaaaaac-cggt--tctcgt-c-c-gatcacc-g-aagtc--aagc-ccggtagggcc-ag-g---ttagt Acipenser_gueldenstaedtii ---gcctgc-ggccaca--cca-ccttg-aataagc-ctga--tctcgt-c-t-gatctca-g-aagct--acgc-aatgttggg-c-ta-g--gttagt Fusarium_asiaticum ---acatac-gaccaca--cct-gcgag-aaaatac-ggga--tcccgt-c-c-gctctcc-catcgtc--aagc-tcgcaagggg--tg-g--attagt Nitella_flexilis a--tggtac-ggtcata--cca-cggct-aatgcgc-ccga--tcccat-c-c-gaactcg-g-aagcc--aagc-gccgttgggcc--g-g--aatagt Streptococcus_pneumoniae_R6 ----taagt-gacgata--gcc-tagga-gatacac-ctgt--acccatgc-c-gaacaca-g-aagtt--aagc-cctagaacgcc-g------gaagt Bacillus_subtilis tttggtggc-gat-agc--gaa-gaggt-ca--cac-ccgt--tcccatac-c-gaacacg-g-aagtt--aagc-tcttcagcgcc-g------atggt Methanococcus_jannaschii tggtacggc-ggtcata--gcg-ggggg-gccacac-ccga--acccat-c-ccgaactcg-g-aagtt--aagc----cccccagc--g-a----tgcc Actinokineospora_riparia gt-aacggc-ggtcata--gcg-gtggggaaacgcc-cgg---tcccat-c-ccgaac-cc-ggaagct--aagc-ccaccagcgcc-g------atggt Streptomyces_griseus gt-ttcggt-ggtcatag-cgt-taggg-aaacgcc-cggt--tacatt-c-c-gaacccg-g-aagct--aagc-ctttcagcgcc-ga-t--ggtact Bacteroides_thetaiotaomicron_VPI_5482 at-tcaggt-ggttata--gca-cgagg-gttccac-ctct--tcccattc-c-gaacaga-g-aagtt--aagc----ctcgtcac-gc-c--gatggt Vibrio_vulnificus_YJ016 tg-cttggc-gaccata--gcg-ttttg-gacccac-ctgaa-tccatt-c-c-gaactca-g-aagtg--aaac-gaaatagcgtc-g------atggt Vibrio_fluvialis tg-cctggc-gaccata--gtg-ttttg-gacccac-ctgat-tccatt-c-c-gaactca-g-aagtg--aaac-gaaacagcgtc-g------atggt Yersinia_pestis_biovar_Mediaevails_str._91001 tg-cctggc-ggccata--gcg-cggtg-gtcccac-ctga--tcccatgc-c-gaactca-g-aagtg--aaac-gccgtagcgcc-g------atggt Halothiobacillus_neapolitanus g--cctggt-gtccata--gag-cggtg-gaaccac-ctgt--tcccat-c-ccgaacaca-g-aagtg--aaac-gccgcatcgcc--g-a----tgat uncultured_marine_bacterium_Ant4D3 tg-cttggc-gaccata--gcg-agatg-gaaccac-ctga--ccccattc-c-gaactca-g-aagtg--aaac-gttttagcgcc-g------atggt Legionella_pneumophila t--cctggc-gactata--gcg-atttg-gaaccac-ctga--taccat-ctc-gaactca-g-aagtg--aaac-atttccgcgcc--a-a----tgat Prochloron_sp. tt-cctggt-gtctcta--gcg-ctttg-gaaccacttcga--ttccat-c-ccgaactcg-a-ttgtga-aact-ttgctgcggct-aa-g------at Francisella_tularensis_subsp._holarctica_OSU18 gc-attgac-gatgata--gca-gtctg-gaaccac-ctga--tcccattc-c-gaactca-g-aagtg--aaac-ggtctcacgcc--a-a----tgat Mycoplasma_mobile_163K a--acaagc-aactatag-caa-gagtg-ta--cac-ctga--acccattc-c-gaactca-g-tagtt--aagc-----------c-tc-t-------t Neorickettsia_sennetsu_str._Miyayama ----ctagt-gataata-gcga-aagtg-aaac-ac-tcga-ctccatt-c-c-gaactcg-a-aagt--gaaac-ctttttgcg-c-cg-a----tggt #=GC SS_cons .................................<<<.<<<<.................>>>.>...>>>................<<.<<.<........ AY695111 --ct-tgga-tgggagaccg-cct-gg-ga-a-tacca--gg--tgctgt-aagctt AB234037 a-c---gg--tgggggacca--c---g--------c-g--gg---------aatcct Eremothecium_gossypii t-ag-tgtagtgggtgaccatacg-cg-aa-a-ctc-a--gg--tgctgc-aatc-t Arabidopsis_thaliana --ct-agga-tgggtgacct-ccc-gg-ga-a-gtcct--cg--tgttgc-atccct Arabidopsis_thaliana a-ct-agga-tgggtgacctcccg-gg-aa-g-tcctc--g---tgttgc-atccct Arabidopsis_thaliana a-ct-agga-tgggtgacct-ccc-gg-ga-a-gtcct-cg---tgttgc-atccct Triticum_turgidum_subsp._dicoccoides aact-aggattgg-tgacct-cct-gg-ga-a-gtcct-cg---tgttgc-attccc Secale_cereale_subsp._ancestrale a-ct-agga-tgggtgacct-cct-gg-ga-a-atcct-cg---tgttgc-attccc Eleusine_coracana a-ct-agga-tgggtgacct-cct-gg-ga-a-gtcct-cg---tgttgc-at-ccc Solanum_berthaultii a-ct-agga-tgggtgaccc-cct-gg-ga-a-gtcct-cg---tgttgc-atccct Pinus_densata a-ct-ggga-tgggtgacct-ccc-gg-ga-a-gtcct-ag---tgttgc-accctc Abies_alba a-ct-ggga-tgggtgacgt-ccc-gg-ga-a-gtcct-ag---tgttgc-accctc Drosophila_melanogaster a-ct-taga-tgggggaccg-ctt-gg-ga-a-caccg-cg---tgttgt-tggcct Samia_cynthia_ricini_x_Bombyx_mori a-ct-tgga-tgggtgaccg-cct-gg-ga-a-cacta-cg---tgatgt-tggctt Cerastoderma_glaucum a-ct-tgga-tgggtgaccg-cct-gg-ga-a-tacc--ggg--tgctgt-agactt Lingula_anatina a-ct-tgga-tgggtgaccg-cct-gg-ga-a-tacct--gg--tgctgt-agactt Acipenser_gueldenstaedtii a-ct-tgga-tgggagacca-cct-gg-ga-atatcaa--g---tgctgt-aggcat Fusarium_asiaticum a-gt-tggg-tcggtgacga-cca-gc-ga-a-taccc-g-c--tgttgt-at--gt Nitella_flexilis a-ct-ggga-tgggtgacct-cct-gg-ga-a-gtcc--cgg--tgctgt-acctat Streptococcus_pneumoniae_R6 a-gt-tggg--ggttgccc--cct-gt-ga-g-at--a-ggg--aagtcg-cttagc Bacillus_subtilis a-gt-cgg--ggg-tttccc-cct-gt-ga-g-ag--t-agg--acgccg-ccaagc Methanococcus_jannaschii c-cg-agta-ctgccatctg-gcg-gg-aa-a-gggg--cga--cgccgc-cggcca Actinokineospora_riparia a-ct--gca-ctcgtgaggg-tgt-gg-ga-g-ag--t-agga-cgccgc-cggact Streptomyces_griseus g-ca-ggg---gg--gacc--ctg-tg-gg-a-gagta-gga--cgccgc-cgaaca Bacteroides_thetaiotaomicron_VPI_5482 a-ct------gcg-taacag---t-gg-gaga-gtaggtagc--cg--cc-attttt Vibrio_vulnificus_YJ016 a-gtgtgg---gg-tttcc--ccatgt-ga-g-ag--t-aga--acatcg-ccaggc Vibrio_fluvialis a-gtgtgg---gg-tttcc--ccatgt-ga-g-ag--t-agaa-catcgccaggcat Yersinia_pestis_biovar_Mediaevails_str._91001 a-gtgtgg---gg-tctcc--ccatgc-ga-g-ag--t-aggacactgcc-aggcat Halothiobacillus_neapolitanus a-gtgtgg---gg-tctcc--ccatgt-ga-a-agta--ggt--caacgc-caggct uncultured_marine_bacterium_Ant4D3 a-gtgtgg---gg-tttcc--ccatgt-ga-g-ag--t-aggt-catcgc-caagca Legionella_pneumophila a-gt-gtg--agg-cttcct-cat-gc-ga-a-agta--ggt--catcgc-cagggt Prochloron_sp. a-ct-tgc--tgggttgctg-gct-gg-ga-a-aatag-ctc--gatgcc-aggatt Francisella_tularensis_subsp._holarctica_OSU18 a-gt-ctg---gc-actgc--cca-ggtga-a-agta--ggta-atcgtc-aaacct Mycoplasma_mobile_163K agcg-tcg--aagataccagtaat-gg-ga-a-aatag-ag---cgttgc-t-tttt Neorickettsia_sennetsu_str._Miyayama a-ct-gct------tgt----gtg-gg-ag-a-gtagg-tg---gttgct-aggtcc #=GC SS_cons ..<<.<<<..<<<....>>>.>>>.>>........>>>..>>...............